FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005310340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14785247
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG821550.013.591211145
AAGGGGG223850.08.194734145
AGGGGGG222000.08.047228140-144
ATGCCGG41050.07.77161145
AAAAGGG261950.07.611772145
AGAAATG213550.07.605362145
GAAATCG37250.07.5911884145
CTTGAAA421600.07.3262286145
AAAGGGG286500.07.263212145
GCTTGAA472250.07.0164223145
TGCTTGA489350.06.9194045145
CCGTCTT579450.06.8320036145
GCCGTCT608300.06.6152554145
ATGCCGT658100.06.4562035145
CGTATGC746000.06.45358145
CGCGTAG22553.719888E-76.42949773
CACATTA93850.06.335064145
GTATGCC764650.06.324622145
CGTCTTC561900.06.2453647145
TATGCCG667700.06.194478140-144
Produced by FastQC (version 0.11.5)