FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005310348

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310348
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7556083
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG551700.014.809723145
AGGGGGG118900.013.902055145
AAGGGGG126750.012.354688145
AAAGGGG161400.09.882007145
ACGGTAT8256.0147804E-48.7876944
AAAAGGG189800.08.212299140-144
TTCCATG108400.08.025609145
ACACGTA18104.4862463E-77.209745145
CCGTCTT400300.06.773483145
AAAAAGG269050.06.709534145
TGCTTGA361200.06.703857145
GCCGTCT412950.06.3904276145
GTCTTCT430600.06.26318145
TATGCCG462000.06.2454987145
CTGCTTG347300.06.241549145
CTTGAAA321550.06.200264145
CGTCTTC386350.06.132304140-144
TCGTATG519200.06.1299343145
GCTTGAA351050.05.98901145
ATGCCGT451750.05.9539027145
Produced by FastQC (version 0.11.5)