FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005310367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11011631
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA8300.027.404841
CGTATGC7100.024.71769145
CGTCCCG10850.020.5294435
CCCGATC11850.018.60653938
CCGATCT12350.018.03541239
CTCGTAT12500.017.81955344
GTCCCGA12550.017.74872236
TCGTATG12300.017.74345845
TCTCGTA12750.017.64589743
ACACGTC13300.017.59298513
TCCCGAT12450.017.5298437
ATCGGAA13700.016.757952
CGTCTGA14200.016.6365316
TCACCCG13550.016.60459930
ACCCGTC13750.016.19981632
TCGGAAG14850.016.0620273
ATCTCGT14250.015.47280442
CACCCGT14150.015.42385331
CCGTCCC15300.014.85277234
CCCGTCC15700.014.76097933
Produced by FastQC (version 0.11.5)