FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005310538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22551337
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC13300.021.47839245
CTCGTAT15550.018.08192643
TCTCGTA16700.016.70206842
AACGATC17950.015.808145537
ATCGGAA17600.015.7308891
TCGTATG17750.015.71412944
ACACGTC19100.014.72212912
CGTCTGA20100.014.43434615
CGTTGGA58050.014.1143211
GTCACGT20700.013.69802428
TCGGAAG20500.013.6099992
GATCGGA8500.013.5055441
AGTCACG21050.013.04246527
ATCTCGT21050.013.03566941
ACGGGAT41000.012.7299599
CGGAAGA23500.012.63546853
AACGGGA55650.012.0063578
AAACGGG67750.011.9521167
CGGGATT40200.011.69537610
AAACGAT24450.011.51346436
Produced by FastQC (version 0.11.5)