Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005310567 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23298151 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATGC | 2150 | 0.0 | 28.46424 | 45 |
CTCGTAT | 2135 | 0.0 | 27.715773 | 43 |
TCGTATG | 2315 | 0.0 | 25.949522 | 44 |
ATCGGAA | 2410 | 0.0 | 25.32995 | 1 |
TCTCGTA | 1965 | 0.0 | 24.159557 | 42 |
TCGGAAG | 2565 | 0.0 | 23.510519 | 2 |
CGTCTGA | 2650 | 0.0 | 22.752548 | 15 |
ACACGTC | 2690 | 0.0 | 22.330585 | 12 |
ATCTCGT | 2305 | 0.0 | 20.987463 | 41 |
CGGAAGA | 2920 | 0.0 | 20.806297 | 3 |
ACGTCTG | 3150 | 0.0 | 19.283878 | 14 |
CACGTCT | 3580 | 0.0 | 17.281874 | 13 |
GCACACG | 3685 | 0.0 | 16.850607 | 10 |
CACACGT | 3935 | 0.0 | 15.837051 | 11 |
AATCTCG | 3310 | 0.0 | 14.614981 | 40 |
ACTCGTA | 775 | 0.0 | 13.64474 | 42 |
CGTTGGA | 5590 | 0.0 | 13.459123 | 1 |
AACGGGA | 5170 | 0.0 | 11.880321 | 8 |
ACGGGAT | 3900 | 0.0 | 11.710825 | 9 |
AAACGGG | 6370 | 0.0 | 11.549532 | 7 |