FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005310589

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310589
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13111156
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG4100.013.71896745
CGTTGGA29000.011.9495781
AACGGGA26850.010.4758838
ACGGGAT20500.010.2083129
AAACGGG32250.09.9777177
GAAACGG34450.09.9294986
GGAAACG33800.09.9208175
GATCGGA4001.4970283E-89.5635421
CGCCCGG16850.09.21328435
ACCGCGC10400.09.08617831
TATCTCG5751.4551915E-118.99964238
CGGGATT19750.08.886332510
ACAGGCG46600.08.88376718
CTCGTAT5607.4578566E-118.83893541
CCCGCGT2350.00270624718.617961
CGGGATA4501.01306796E-78.50024610
CACCGCG11500.08.41270930
CGTTAAC2952.6396275E-48.3907441
ACGCCCG9200.08.31488634
TCTCGTA6309.822543E-118.2139640
Produced by FastQC (version 0.11.5)