FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005310947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences407986896
Sequences flagged as poor quality0
Sequence length75
%GC24

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA8003950.1961815459876927TruSeq Adapter, Index 12 (100% over 62bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5424070.13294716210689278No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)