Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312187 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 43813880 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 1512095 | 3.4511780285151645 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 1137829 | 2.596960141398114 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCACACGTCTAGGGAAAGAGTGTAGATCGGAAGAGCGTCG | 99761 | 0.22769268551427083 | No Hit |
ACACTCTTTCCCTAGACGTGTGCTCTTCCGATCTAGATCGGAAGAGCGTC | 56742 | 0.12950690511773894 | Illumina Multiplexing PCR Primer 2.01 (95% over 22bp) |