Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312201 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 50573501 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 1213071 | 2.398629669715767 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 869363 | 1.719008933156516 | Illumina Single End PCR Primer 1 (100% over 50bp) |
ACACTCTTTCCCTAGACGTGTGCTCTTCCGATCTAGATCGGAAGAGCGTC | 98552 | 0.19486885038866503 | Illumina Multiplexing PCR Primer 2.01 (95% over 22bp) |
GATCGGAAGAGCACACGTCTAGGGAAAGAGTGTAGATCGGAAGAGCGTCG | 69848 | 0.13811185426929412 | No Hit |