Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312249 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 39069877 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 1023673 | 2.6201080694469554 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 733517 | 1.87744896151068 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCACACGTCTAGGGAAAGAGTGTAGATCGGAAGAGCGTCG | 79745 | 0.20410865383579274 | No Hit |
ACACTCTTTCCCTAGACGTGTGCTCTTCCGATCTAGATCGGAAGAGCGTC | 54901 | 0.1405200226251032 | Illumina Multiplexing PCR Primer 2.01 (95% over 22bp) |