Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312297 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 41071353 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 549169 | 1.3371095907164294 | Illumina Single End PCR Primer 1 (100% over 50bp) |
CACACACACACACACACACACACACACACACACACACACACACACACACA | 544132 | 1.324845568150628 | No Hit |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 537325 | 1.3082719724378207 | Illumina Single End PCR Primer 1 (100% over 50bp) |
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | 83707 | 0.20380872283413698 | No Hit |
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | 45704 | 0.11127950910212282 | No Hit |