Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312304 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 52000791 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | 133701 | 0.25711339660198634 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTGAGGAATCTCGTAT | 100561 | 0.19338359679951792 | TruSeq Adapter, Index 25 (97% over 38bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATTGAGGAATCTCGTA | 96279 | 0.1851491066741658 | TruSeq Adapter, Index 25 (97% over 38bp) |
CACACACACACACACACACACACACACACACACACACACACACACACACA | 78986 | 0.1518938433071143 | No Hit |
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | 57060 | 0.10972910008234299 | No Hit |