Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312328 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 49386856 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGCTGAAATCTCGTA | 225644 | 0.45689079701692287 | TruSeq Adapter, Index 10 (97% over 38bp) |
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | 184719 | 0.37402461902008904 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGCTGAAATCTCGTAT | 175325 | 0.35500336364801194 | TruSeq Adapter, Index 10 (97% over 38bp) |
CACACACACACACACACACACACACACACACACACACACACACACACACA | 108549 | 0.2197932988485843 | No Hit |
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | 94577 | 0.19150237059026393 | No Hit |