Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312332 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 46635114 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCGAGTAAATCTCGTAT | 238087 | 0.5105316135819888 | TruSeq Adapter, Index 6 (97% over 37bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCGAGTAAATCTCGTA | 228743 | 0.49049520925369666 | TruSeq Adapter, Index 6 (97% over 37bp) |
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | 134913 | 0.28929488625244915 | No Hit |
CACACACACACACACACACACACACACACACACACACACACACACACACA | 64503 | 0.13831423249013608 | No Hit |
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | 56843 | 0.12188884109943421 | No Hit |