FastQCFastQC Report
Thu 25 Aug 2022
EGAF00005312360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005312360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51901307
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG2476980.47724809704695875No Hit
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAAGGACACATCTCGTA1662680.32035416757423857TruSeq Adapter, Index 7 (97% over 36bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAAGGACACATCTCGTAT1653140.3185160635742757TruSeq Adapter, Index 7 (97% over 36bp)
CACACACACACACACACACACACACACACACACACACACACACACACACA1392350.2682687740407No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1147380.22106957730370835No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)