Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312426 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 39696545 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAAGCTAATCTCGTAT | 792398 | 1.9961384548705687 | TruSeq Adapter, Index 5 (97% over 36bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACACAAGCTAATCTCGTA | 641140 | 1.6151027753170961 | TruSeq Adapter, Index 5 (97% over 36bp) |
ACACTCTTTCCCTAGACGTGTGCTCTTCCGATCAGATCGGAAGAGCACAC | 60791 | 0.15313927194419563 | Illumina Multiplexing PCR Primer 2.01 (95% over 21bp) |
ACACTCTTTCCCTACACGACGCTCTTCCGATCTAGATCGGAAGAGCACAC | 43664 | 0.10999445921553122 | Illumina Single End PCR Primer 1 (100% over 33bp) |