Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005312529 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 51866121 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CACACACACACACACACACACACACACACACACACACACACACACACACA | 460512 | 0.8878859477461212 | No Hit |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 292063 | 0.5631093946663179 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 244822 | 0.47202681688881265 | Illumina Single End PCR Primer 1 (100% over 50bp) |
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | 88243 | 0.17013610869415124 | No Hit |