FastQCFastQC Report
Sun 5 Jun 2022
EGAF00005312755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005312755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28525325
Sequences flagged as poor quality0
Sequence length120
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2275410.7976806574508792No Hit
GCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG1399180.4905044903081735No Hit
GCTCCCATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG634430.2224093853444264No Hit
GCTCCTATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG542630.1902274557783303No Hit
CGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTG531570.18635019934041067No Hit
GCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCGAGGCGAGC448920.15737594576047775No Hit
GCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCC444840.1559456377797624No Hit
GCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAA410400.14387215570725312No Hit
TGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTG401580.14078016639600074No Hit
GCTCCGATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG401340.14069603063242925No Hit
GCCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTG397210.13924819436763647No Hit
AGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTG381080.13359356992426905No Hit
ATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTG375520.1316444247348628No Hit
GGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTG348850.12229483800798063No Hit
GCTTCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG347290.12174795554476593No Hit
GCTCTAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG324700.11382867679859915No Hit
GCCCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG323560.11342903192163455No Hit
TCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACA303680.10645978617246254No Hit
TGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTC292660.10259655236180482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)