FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005312904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005312904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87757791
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA638900.013.2569261
TCGGAAG660250.012.8545142
CGGAAGA682050.012.4457593
TATGCCG195150.011.51820545-49
CTCGTAT221700.010.11133440-44
CGTATGC227250.09.757245-49
GCCGATC212400.09.74718135-39
TCTCGTA224500.09.41039540-44
ATGCCGT246450.09.23242445-49
CCGATCT241500.08.82481435-39
AGCCGAT246300.08.57042435-39
TAGCCGA259600.08.48317535-39
GCCGTCT269650.08.31804250-54
AGAGCAC1145100.07.79292157
ATCTCGT282400.07.681243440-44
AGCACAC1202400.07.5603119
CGTCTTC321450.07.284341350-54
TCGTATG247150.07.227942540-44
GAGCACA1243650.07.22794068
GAAGAGC1288700.07.0820595
Produced by FastQC (version 0.11.5)