FastQCFastQC Report
Wed 6 Jul 2022
EGAF00005315908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005315908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472956497
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAACTCAGAAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT18734330.39611106135201263No Hit
AGAACTCAGAATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA14886370.3147513586223132No Hit
AGAACTCAGAAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5727850.12110733304928044No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)