FastQCFastQC Report
Mon 30 May 2022
EGAF00005315909

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005315909
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494400026
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTAATTGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24271070.49091967483027604No Hit
TCTTAATTGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16872970.3412817377157662No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC10189360.20609545841731003TruSeq Adapter, Index 2 (100% over 50bp)
TCTTAATTGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6069320.12276132040494675No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)