FastQCFastQC Report
Thu 26 May 2022
EGAF00005315919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005315919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467685428
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAACTCAGAAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT23282250.49781858929331446No Hit
AGAACTCAGAATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16328370.34913146791479677No Hit
AGAACTCAGAAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7377730.15774983692671307No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)