FastQCFastQC Report
Fri 13 May 2022
EGAF00005315942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005315942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences442925275
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACGAATAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT13457270.303827095891062No Hit
GTTGACGAATATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA9814750.22158929629834287No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT5381330.12149521157942499Illumina Single End PCR Primer 1 (100% over 50bp)
GTTGACGAATAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4535670.10240260052894927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)