FastQCFastQC Report
Tue 5 Jul 2022
EGAF00005315961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005315961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491268965
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACCTGTCGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT20333860.4139048352057004No Hit
TCACCTGTCGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA13983230.28463491480680037No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTATG6711570.13661701589474515TruSeq Adapter, Index 7 (97% over 35bp)
TCACCTGTCGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5060170.10300202863415156No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)