FastQCFastQC Report
Fri 13 May 2022
EGAF00005315967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005315967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449386302
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACGAATAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT16903630.376149204476642No Hit
GTTGACGAATATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA10654010.23707909993215592No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTATG6484500.1442967881117124TruSeq Adapter, Index 15 (97% over 39bp)
GTTGACGAATAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5666650.1260975239961809No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)