FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005316108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences322779977
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1912700.020.7333561
TCGGAAG2010650.019.7891582
CGGAAGA2109150.018.851273
TATGCCG719800.011.50268645-49
AGAGCAC3898300.010.6098257
CTCGTAT791400.010.49848740-44
AGCACAC4052600.010.3113929
CGTATGC835850.09.846662545-49
GAGCACA4267450.09.831328
TCTCGTA769000.09.64844240-44
ACCGAAC855150.09.56363830-34
GAAGAGC4427550.09.4659975
ATGCCGT903500.09.20889245-49
CCGAACA937400.08.87330-34
TCGTATG958750.08.63723940-44
TGCCGTC971200.08.40870245-49
GCCGTCT988900.08.24512750-54
CGAACAA1044600.08.04571530-34
ATCTCGT974450.07.765973640-44
CACCGAA1133550.07.44890530-34
Produced by FastQC (version 0.11.5)