FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005316157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences324928611
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1612950.026.6255429
GAGCGTC1973300.021.9209238
AGAGCGT2154200.020.1642347
ATCGGAA2318750.019.0241241
TCGGAAG2414400.018.3830972
CGGAAGA2558900.017.425693
AAGAGCG2557950.017.4234166
CGCCGTA621850.016.2656755-59
TCGCCGT716450.014.07950155-59
GCCGTAT794750.012.90582355-59
GTCGCCG835150.012.60616955-59
TGGTCGC926850.011.51481450-54
CGTATCA933250.011.047460-64
GTGGTCG998450.010.73699450-54
GAAGAGC4798650.09.76065
CCGTATC891600.09.74109855-59
GGTCGCC997400.09.15945650-54
TCTCGGT1245950.08.99387645-49
CTCGGTG1422050.07.93925145-49
CGGTGGT1417400.07.766950650-54
Produced by FastQC (version 0.11.5)