FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005316169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences303434629
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1305550.019.7157529
CGCCGTA505400.016.6940255-59
GAGCGTC1650200.015.813658
TCGCCGT585600.014.4894255-59
AGAGCGT1871200.014.1048977
ATCGGAA1903000.013.7385621
TCGGAAG1979800.013.2882322
GCCGTAT662650.012.91624755-59
CGGAAGA2142150.012.3540363
AAGAGCG2225800.011.995586
GTCGCCG728500.011.80446155-59
CGTATCA810300.010.61444160-64
TGGTCGC833050.010.57428950-54
GTGGTCG856550.010.2807950-54
GATCGGA1620550.010.1798551
TCTCGGT1053200.08.58311745-49
CTCGGTG1184700.07.654881545-49
CGGTGGT1237050.07.333063650-54
CCGTATC766750.07.208533355-59
GAAGAGC4242300.06.73869045
Produced by FastQC (version 0.11.5)