FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005316219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences317236145
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1714650.08.353599
CGCCGTA412050.07.72675355-59
GAGCGTC2088500.07.025668
AGAGCGT2301250.06.42692237
TCGCCGT514550.06.33675955-59
GCCGTAT575150.05.86553555-59
ATCGGAA2527250.05.8375781
TCGGAAG2607100.05.7077332
AAGAGCG2721600.05.50843956
CGGAAGA2734550.05.50159453
GATCGGA2359550.05.3815994145
GTCGCCG646650.05.190103555-59
CGTCGTG1628350.05.1112947145
AGATCGG2556950.05.01146145
Produced by FastQC (version 0.11.5)