FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005316223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences319213279
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1591750.011.5713679
CGGCGTA168650.011.5028037
GAGCGTC1949350.09.6146318
AGAGCGT2167950.08.7229167
CGCCGTA470550.08.39955555-59
ATCGGAA2314100.08.1605091
TCGGAAG2399350.07.8716052
CCGCGTA132450.07.8188847
CGGGGTA369250.07.80162337
GCGTAGA404550.07.75037059
AAGAGCG2540150.07.46474276
CGGAAGA2551800.07.4545383
TCGCCGT576300.06.98399955-59
CGGTGTA836050.06.90877967
GCCGTAT627050.06.555124855-59
ACGGCGT316250.06.3210316
CGGAGTA417350.06.1685447
GGCGTAG462300.05.85247148
GTCGCCG750850.05.52064455-59
CCGTATC735950.05.45517155-59
Produced by FastQC (version 0.11.5)