FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005316227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences332865751
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1617850.017.333319
GAGCGTC2006350.014.1567068
CCGATCG119050.013.2751323
AGAGCGT2234650.012.7007027
CGATCGT115650.012.3444554
ATCGGAA2418800.011.8970271
TCGGAAG2484700.011.6303832
CGCGTAG239500.011.2425958
CGCCGTA541600.010.99633455-59
CGGAAGA2642650.010.9906653
AAGAGCG2650150.010.9032876
TCGCGTA164450.09.3372987
CCGGTCG237850.09.2472433
TCGCCGT649900.09.21518955-59
ACCGGTC273300.09.0335062
AACCGGT348850.08.9908731
CGGTCGT218900.08.8843774
CGTTCGG133300.08.7974584
GCCGTAT712350.08.62095755-59
CGCTCGT262450.08.5480224
Produced by FastQC (version 0.11.5)