FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005316233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences333615694
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC1876400.011.5268359
GATCGGA2035250.010.5649031
AGAGCGT2105650.010.3627848
ATCGGAA2149650.010.1557692
TCGGAAG2255450.09.7019093
CGGAAGA2403000.09.1698334
AAGAGCG2544750.08.7059817
CGCCGTA670650.07.62701345-49
GCCGTAT816800.06.459284345-49
ATTGGCG459350.06.3010531
CCGTATC902750.05.93260845-49
TCGCCGT758650.05.93033245-49
CGTATCA937000.05.677082545-49
GTCGCCG979900.05.39138740-44
TGGTCGC1037650.05.24497940-44
GAAGAGC4817700.05.1003426
Produced by FastQC (version 0.11.5)