FastQCFastQC Report
Thu 12 May 2022
EGAF00005316447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences292227163
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3345273111.4475090736175No Hit
GGGGCCTTCGTGTCCGAGGCCAGCACACCAAGACCACTGGCCGCCGTGGC3987020.13643563996821198No Hit
GCTTCATCCGCCAACTAATATTTCACTTTACATCCAAACATCACTTTGGC3193750.10928997726333879No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)