FastQCFastQC Report
Mon 30 May 2022
EGAF00005316555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences316571627
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3563962511.257997230434047No Hit
GGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA8581000.2710602994121138No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4949910.15635987491702785No Hit
GGGGCCTTCGTGTCCGAGGCCAGCACACCAAGACCACTGGCCGCCGTGGC4546320.14361110131957594No Hit
GCTTCATCCGCCAACTAATATTTCACTTTACATCCAAACATCACTTTGGC3713670.11730899686723976No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAA3651880.11535714791016316No Hit
AGAGTAAAACCAAGCTGGCCCAAGGTGTCCTGCAGGCTGTAATGCAGTTT3284400.10374903244250629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)