FastQCFastQC Report
Thu 26 May 2022
EGAF00005316559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005316559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences361076429
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG207419615.744479377245641No Hit
CGGGCTAATTTCCCCATAGCCGTGGGGTGACTTCCCTGGTCACCAAGGCA6365100.1762812382305908No Hit
GGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA6242990.1728994057377254No Hit
AGGGCTTCTGCCTAAGCCTCTCCCTCCAGCCAATAGGCAGCTTTCTTAAC5323650.14743831423014322No Hit
CCCCATAGCCGTGGGGTGACTTCCCTGGTCACCAAGGCAGTGCATGCATG4916000.13614846069057585No Hit
GGTCACCAAGGCAGTGCATGCATGTTGGGGTTTCCTTTACCTTTTCTATA4523410.12527569336296943No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)