EGAF00005317847 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317847
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3525297
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	64

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	20534	0.5824757460151584	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	17144	0.4863136354185194	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13248	0.37579812424314885	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9119	0.2586732408645286	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	5652	0.16032691713634342	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5375	0.15246942314363868	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4722	0.1339461611319557	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4364	0.12379098839048171	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4332	0.12288326345269633	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4079	0.11570656316333063	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4015	0.11389111328775987	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3961	0.11235932745524704	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	1175	57.457973	5
GTCTACG	1170	57.40912	4
CCGAACT	1370	56.7341	67
CGGTTCA	1380	56.16109	5
TACGGCC	1220	55.619385	7
GCCGGTT	1415	54.292797	3
GCGCGGT	7475	53.684246	9
GCCATAC	1280	52.474773	11
CTACGGC	1310	51.53673	6
CGAACTT	1565	51.04431	68
ACCATAT	1560	50.7159	55
GGGGACT	4415	50.597263	1
ACTCTTC	4525	50.317028	5
CGCGGTG	8030	50.103928	10
CTTAGGC	1555	50.08072	18
TGGCGCG	8180	49.52203	15
CATATTG	1590	48.985165	57
CCATATT	1600	48.83754	56
TTAGGCA	1595	48.835186	19
CACCATA	1640	48.190254	54