EGAF00005317862 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317862
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3625398
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	21789	0.60100987532955	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10150	0.27996926130593114	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	9465	0.2610747840650875	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8772	0.24195964139661358	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	6479	0.17871141320208153	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6086	0.16787122406974353	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6005	0.16563698661498683	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5584	0.15402446848594278	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4876	0.13449557814066207	No Hit
GCTCAGACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCG	4519	0.12464838343266035	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4239	0.11692509346560018	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3989	0.11002929885215362	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3939	0.1086501399294643	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3844	0.1060297379763546	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	3787	0.10445749680448876	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	3744	0.10327142013097595	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	6115	39.505074	32
GCGGCAC	6345	38.192352	33
CGGCACC	6495	37.162533	34
CCGTCGC	6315	36.176495	45
GTTATCG	230	36.05762	6
TCGCCGG	6405	35.728798	48
GCACCCC	6795	35.594044	36
CCCGTCG	6475	35.480423	44
AGGACCG	740	34.74009	70
GTGCCGT	570	34.676807	1
TAGCGTC	645	34.287827	11
GGCACCC	7055	34.26851	35
CACCCCC	7210	33.799046	37
GTTCCGT	380	33.76426	1
CCCCCGA	7235	33.635025	19
CCCCCGT	7110	31.99565	42
TAGTCCG	460	31.550419	6
GTAGCGT	705	30.87956	10
ACCCGCG	7960	30.646694	25
TATCGGA	250	30.408596	8