EGAF00005317865 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317865
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3607972
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15934	0.4416331390598375	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12113	0.3357287695137324	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	8111	0.22480773132385728	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7799	0.21616021410365713	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5537	0.15346571425720598	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4212	0.11674148247270211	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3981	0.1103389937615924	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3685	0.10213493896294096	No Hit
GGGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCTAGCTGC	3654	0.10127573052119031	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6990	54.51403	9
GCCGGTT	1280	52.58612	3
CGCGGTG	7295	52.28214	10
CGGTTCA	1310	51.381855	5
TGGCGCG	7390	51.37651	15
TACGGCC	820	51.352585	7
CCGAACT	1350	50.017265	67
GTCTACG	855	49.253853	4
TCTACGG	875	48.917034	5
CGGCAAT	370	47.863808	1
GTCGTAC	225	47.558228	3
CCGGTTC	1435	46.90609	4
CTACGGC	925	45.526535	6
CGAACTT	1540	44.847637	68
GCCGAAC	1510	44.532337	66
TGTAGTC	8735	44.106953	26
TAGTCCC	8820	43.779778	28
GTAGTCC	8820	43.76943	27
CGTGCCT	8835	43.31866	20
CCTGTAG	8910	43.182632	24