EGAF00005317866 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317866
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3613843
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	22013	0.6091299483679838	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10176	0.28158389835972397	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	9393	0.2599172127842853	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8537	0.23623051693169847	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	6564	0.18163489670137856	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6310	0.17460636779184927	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5888	0.16292904810751324	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5801	0.16052163859913116	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4866	0.13464890422743878	No Hit
GCTCAGACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCG	4376	0.12108993113425237	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4173	0.11547264228136085	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4146	0.11472551519255264	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4094	0.1132866037622553	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3799	0.10512354853268391	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	3796	0.1050405344117052	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTTAGTGCGGACACCCG	3623	0.10025338676860063	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTACGT	205	38.75688	19
CGCGGCA	6190	37.168236	32
CGATCTA	200	36.601994	47
GCGGCAC	6350	36.35246	33
CGGCACC	6405	36.051327	34
CGTTGCG	260	34.66279	1
GCACCCC	6840	33.98166	36
CCGTCGC	6325	33.97297	45
TCGCCGG	6390	33.623608	48
CCCGTCG	6505	33.39507	44
TTATCGG	270	33.251865	7
GGCACCC	7055	32.886833	35
CACCCCC	7250	32.075554	37
GTTATCG	260	31.87457	6
CCCCCGA	7355	31.749645	19
TAGTCCG	505	30.770004	6
TATCGGA	295	30.433912	8
TAGCGTC	675	30.18246	11
GTTCCGT	380	30.101894	1
CCCCCGT	7220	30.017096	42