EGAF00005317867 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317867
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3613843
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15701	0.4344682378288155	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11995	0.331918127046471	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	8117	0.22460853999468158	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7559	0.2091679134926448	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5609	0.1552087348564949	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4314	0.11937430596735939	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3988	0.11035343815434151	No Hit
GGGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCTAGCTGC	3818	0.10564930463221563	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3680	0.10183065506719577	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3644	0.10083448561545147	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	810	55.405563	7
GCGCGGT	7125	53.733078	9
CCGAACT	1255	51.57281	67
GTCTACG	875	51.290432	4
TGGCGCG	7560	51.095104	15
CGCGGTG	7550	50.845543	10
CGGTTCA	1265	50.487312	5
GCCGGTT	1310	49.01655	3
TCTACGG	920	48.031174	5
CGAACTT	1465	46.44092	68
GCCGAAC	1440	44.98297	66
CTACGGC	1005	44.653996	6
CCGGTTC	1435	44.506237	4
GAACGCG	1000	43.897564	24
CGGCAAT	345	43.310436	1
CTTAGGC	1485	43.24857	18
GGCGCGT	9060	43.01726	16
TGAACGC	1030	42.94505	23
CGTGCCT	9045	42.76584	20
TGTAGTC	9105	42.3454	26