EGAF00005317868 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317868
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3614110
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	21668	0.5995390289725548	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10182	0.281729111731519	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	9336	0.25832085907733854	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8864	0.24526093561070358	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	6566	0.18167681669899366	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6373	0.17633663612895015	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5915	0.1636640832736137	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5891	0.16300001936853056	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4821	0.13339383693357423	No Hit
GCTCAGACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCG	4374	0.1210256467014009	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4186	0.11582381277824969	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4097	0.11336124246356641	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3918	0.10840843250482138	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3864	0.10691428871838432	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	3774	0.1044240490743226	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	3700	0.10237651870031626	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTTAGTGCGGACACCCG	3670	0.10154643881896235	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	6360	37.046787	32
GCGGCAC	6610	35.815327	33
CGGCACC	6725	35.21658	34
CCGTCGC	6570	34.198303	45
GCACCCC	7030	33.716824	36
TCGCCGG	6645	33.702602	48
GTTCCGT	345	33.31256	1
CCCGTCG	6805	33.04958	44
AGGACCG	785	32.330135	70
CACCCCC	7410	32.14078	37
CCCCCGA	7480	32.00714	19
GGCACCC	7375	31.979254	35
CCCCCGT	7300	30.684032	42
ACCCGCG	8040	29.3774	25
CCCCGAC	8215	29.10502	20
GTGCCGT	520	28.799059	1
CGCCCTA	1265	27.560211	61
TAGTCCG	415	27.456203	6
TTATCGG	280	27.129343	7
CTTACCC	1325	27.041054	70