EGAF00005317869 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317869
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3614110
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15435	0.42707609895658954	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11507	0.3183909731579836	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7799	0.21579309982263958	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7232	0.2001045900650506	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5471	0.15137890102957574	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4124	0.11410831435678494	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3866	0.10696962737714126	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6700	52.818783	9
CGCGGTG	7050	50.490406	10
GTCTACG	780	50.456078	4
CCGAACT	1235	49.782085	67
TGGCGCG	7205	49.544537	15
TACGGCC	795	49.073902	7
GCCGGTT	1260	48.769993	3
CCGGTTC	1260	47.948025	4
CGGTTCA	1295	46.656654	5
TCTACGG	855	45.630756	5
CGAACTT	1480	43.476967	68
GCCGAAC	1455	42.310314	66
GTAGTCC	8585	42.105057	27
TGTAGTC	8650	41.977535	26
CGTGCCT	8640	41.941288	20
CTACTCG	8535	41.716583	37
TAGTCCC	8700	41.6805	28
TACTCGG	8645	41.279854	38
GGCGCGT	8815	41.07904	16
CGCGTGC	8845	40.9952	18