EGAF00005317871 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317871
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3260202
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	9946	0.3050731212360461	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7972	0.24452472576852602	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7365	0.22590624752699373	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5833	0.17891529420569646	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3394	0.1041039788332134	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3500	50.67024	9
TGGCGCG	3700	48.02328	15
CGCGGTG	3910	45.44472	10
CCGAACT	740	42.648956	67
CGGCATA	235	41.021034	1
CTACTCG	4345	40.728874	37
TACTCGG	4325	40.610825	38
GCCGGTT	790	39.51526	3
GTAGTCC	4590	38.973328	27
CGGTAAG	315	38.25374	1
ACTCGGG	4595	38.253727	39
TAGTCCC	4700	38.234444	28
TGTAGTC	4720	38.10485	26
CGTGCCT	4710	38.082207	20
CGGTTCA	815	37.879887	5
GTACGCA	475	37.486244	65
CCTGTAG	4970	36.28864	24
GGGGTAG	1500	36.264545	1
AGGATCG	4775	36.226654	59
GATCGCT	4805	36.224133	61