EGAF00005317875 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317875
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3355303
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	10213	0.30438383657154067	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8713	0.2596784850727341	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7624	0.22722239988460058	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6138	0.18293429833311628	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3539	0.1054748259695175	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3715	51.173588	9
TGGCGCG	3955	47.799362	15
CGCGGTG	4130	46.114536	10
CCGAACT	700	43.536327	67
TACTCGG	4530	42.984325	38
GCCGGTT	695	42.948837	3
CTACTCG	4540	42.935577	37
CGGCATA	255	41.85564	1
CGGTTCA	745	40.526897	5
TAGTCCC	4790	40.33285	28
ACTCGGG	4840	40.25129	39
CGGGTAG	480	40.16791	1
GTAGTCC	4865	39.69317	27
TGTAGTC	4960	39.123848	26
CGTGCCT	4940	38.47357	20
GGGGACT	3230	38.1604	1
CCTGTAG	5135	37.55361	24
AGGATCG	4945	37.458035	59
GTACGCA	485	37.42036	65
GATCGCT	5080	36.689926	61