EGAF00005317879 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317879
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4153396
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	17411	0.41919913246894824	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10798	0.25998002598355663	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8849	0.2130545702841723	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7212	0.17364103976601317	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5095	0.12267070127673836	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5575	51.384087	9
CCGAACT	985	50.150955	67
TCGCGTA	80	49.119995	60
TGGCGCG	5995	47.67216	15
CGGTTCA	1010	46.25926	5
CGCGGTG	6465	44.468582	10
GCCGGTT	1060	44.082016	3
CTACTCG	6750	42.572372	37
TACTCGG	6770	42.34347	38
GTAGTCC	6925	41.4992	27
TAGTCCC	6930	41.25417	28
TACGGCC	560	40.192	7
TGTAGTC	7210	40.066666	26
ACTCGGG	7415	39.540607	39
CGTGCCT	7300	39.426914	20
CCGGTTC	1205	39.05634	4
CCTGTAG	7445	38.739773	24
GCTACTC	7635	37.68123	36
CGGTAAG	300	37.661423	1
AGTCCCA	7665	37.37864	29