EGAF00005317881 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317881
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4179001
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	17479	0.41825785636327917	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11225	0.2686048651340356	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9383	0.22452734517172884	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7540	0.18042589604549028	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5191	0.12421628996977988	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5850	50.848106	9
CCGAACT	1010	49.25248	67
TGGCGCG	6375	46.39195	15
CGGTTCA	1060	44.732494	5
TACGGCC	520	44.60872	7
GCCGGTT	1065	44.202175	3
CGCGGTG	6785	44.14057	10
CTACTCG	7180	41.939243	37
TACTCGG	7270	41.60926	38
GTAGTCC	7350	40.92905	27
TAGTCCC	7475	40.280186	28
CTTAGGC	1190	40.179726	18
GTCTACG	590	39.894337	4
TGTAGTC	7630	39.53005	26
ACTCGGG	7840	38.97666	39
CGGGTAG	565	38.764668	1
CGTGCCT	7620	38.54063	20
CCTGTAG	7875	38.2054	24
GGTACGA	300	37.523804	3
GCTACTC	8075	37.32976	36