EGAF00005317885 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317885
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4236946
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	17445	0.4117352451506345	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11316	0.267079165040102	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9027	0.2130544028647049	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7915	0.18680908371265528	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5386	0.12711986416631224	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5635	50.19158	9
CCGAACT	1000	48.656513	67
TGGCGCG	6025	46.659542	15
GCCGGTT	1050	44.83943	3
CGCGGTG	6475	43.838314	10
TACGGCC	545	43.820465	7
CGGTTCA	1115	42.22597	5
TCTACGG	565	41.061604	5
CTACTCG	7120	40.74252	37
TACTCGG	7165	40.37069	38
TAGTCCC	7135	40.322865	28
GTCGTAC	195	40.240513	3
GTAGTCC	7175	39.829052	27
GTCTACG	610	39.150608	4
TGTAGTC	7435	38.82468	26
CCTGTAG	7520	38.43039	24
CGGGTAG	625	38.3665	1
ACTCGGG	7725	38.34338	39
CGTGCCT	7525	38.2168	20
CGGCATT	665	38.11924	1