EGAF00005317889 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317889
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	501000
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6155	1.2285429141716566	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	2460	0.4910179640718563	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	1781	0.35548902195608784	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	1287	0.2568862275449102	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	674	0.1345309381237525	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	577	0.1151696606786427	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	559	0.11157684630738524	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCGTA	30	1.0168442E-5	56.45183	1
GCCGGTT	105	0.0	51.451473	3
GGCGTAT	20	0.007911536	50.806644	1
CCGAACT	115	0.0	50.701	67
GCGCGGT	850	0.0	48.06551	9
TCTACGG	50	8.215284E-8	47.271038	5
TGGCGCG	880	0.0	46.810608	15
GGGGACT	635	0.0	45.87267	1
GCGTCAA	60	6.7739165E-9	45.02003	3
TACTCGG	930	0.0	43.87016	38
CGGGTAG	70	5.293259E-10	43.548557	1
CGCGGTG	965	0.0	43.387184	10
ACTCTTC	670	0.0	43.340183	5
CTACTCG	945	0.0	43.110844	37
CGGTACC	55	1.6957347E-7	43.108673	1
TAGTCCC	950	0.0	43.03861	28
TCTGGTC	660	0.0	42.97367	10
ACTCGGG	980	0.0	42.387768	39
GGGACTC	695	0.0	42.271282	2
TGTAGTC	975	0.0	41.823273	26