EGAF00005317903 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317903
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3493966
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7556	0.2162585440155972	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4852	0.1388679798257911	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4643	0.13288623873271807	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3692	0.10566788572069677	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	2485	45.91352	9
CCGAACT	475	44.13394	67
TGGCGCG	2620	43.547123	15
CGGCATA	315	41.731705	1
CTACTCG	2890	40.156807	37
TACTCGG	2905	39.844254	38
ACTCGGG	3215	37.104977	39
AGGATCG	3165	36.090343	59
CGCGGTG	3215	35.488365	10
GGGGTAC	1230	34.593384	1
GATCGCT	3325	34.176254	61
GTAGTCC	3420	34.087143	27
TAGTCCC	3425	33.84464	28
CGGTAAG	225	33.824646	1
CGGCAAA	710	33.618923	1
GCCGGTT	630	33.37985	3
GGGGTAT	1380	33.089325	1
TGTAGTC	3545	32.972816	26
CGTGCCT	3530	32.854103	20
GTGGCGC	3570	32.441715	14