FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005317908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005317908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3550977
Sequences flagged as poor quality0
Sequence length35-76
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG167720.4723207162423187No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN74720.21042096301947324No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG62090.17485328685598356No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG43210.1216848208253672No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA39330.11075825047585496No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC37890.10670302849046895No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)